48 lines
1.2 KiB
Nix
48 lines
1.2 KiB
Nix
|
{ lib
|
||
|
|
, stdenv
|
||
|
|
, autoreconfHook
|
||
|
|
, fetchFromGitHub
|
||
|
|
, bzip2
|
||
|
|
, xz
|
||
|
|
, zlib
|
||
|
|
}:
|
||
|
|
|
||
|
|
stdenv.mkDerivation (finalAttrs: {
|
||
|
|
# Same name as the Debian library
|
||
|
|
pname = "libstaden-read";
|
||
|
|
version = "1.15.0";
|
||
|
|
|
||
|
|
src = fetchFromGitHub {
|
||
|
|
owner = "jkbonfield";
|
||
|
|
repo = "io_lib";
|
||
|
|
rev = "io_lib-" + builtins.replaceStrings ["."] ["-"] finalAttrs.version;
|
||
|
|
fetchSubmodules = true;
|
||
|
|
hash = "sha256-2Dlx+MXmqar81/Xmf0oE+6lWX461EDYijiZsZf/VD28=";
|
||
|
|
};
|
||
|
|
|
||
|
|
patches = [
|
||
|
|
# Needed so that the lib can be detected
|
||
|
|
./libstaden-install-config-header.patch
|
||
|
|
];
|
||
|
|
|
||
|
|
buildInputs = [ bzip2 xz zlib ];
|
||
|
|
nativeBuildInputs = [ autoreconfHook ];
|
||
|
|
|
||
|
|
# autoreconfHook does not descend into htscodecs folder
|
||
|
|
preAutoreconf = ''
|
||
|
|
pushd ./htscodecs
|
||
|
|
autoreconf --install --force --verbose
|
||
|
|
pushd
|
||
|
|
'';
|
||
|
|
|
||
|
|
meta = {
|
||
|
|
description = "C library for reading/writing various DNA sequence formats";
|
||
|
|
homepage = "https://staden.sourceforge.net";
|
||
|
|
downloadPage = "https://github.com/jkbonfield/io_lib/releases";
|
||
|
|
changelog = "https://github.com/jkbonfield/io_lib/blob/${finalAttrs.src.rev}/CHANGES";
|
||
|
|
license = with lib.licenses; [ bsd3 free ];
|
||
|
|
platforms = lib.platforms.all;
|
||
|
|
maintainers = [ lib.maintainers.kupac ];
|
||
|
|
};
|
||
|
|
})
|