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nixpkgs/pkgs/development/libraries/linbox/default.nix

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pkgs/development/libraries: stdenv.lib -> lib
2021-01-21 18:00:13 +01:00
{ lib, stdenv
linbox: init at 1.5.2
2018-03-08 00:14:05 +01:00
, fetchFromGitHub
, autoreconfHook
, givaro
treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix continuation of #109595 pkgconfig was aliased in 2018, however, it remained in all-packages.nix due to its wide usage. This cleans up the remaining references to pkgs.pkgsconfig and moves the entry to aliases.nix. python3Packages.pkgconfig remained unchanged because it's the canonical name of the upstream package on pypi.
2021-01-19 07:50:56 +01:00
, pkg-config
linbox: Add darwin support
2018-08-18 22:54:22 +02:00
, blas
blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider This is based on previous work for switching between BLAS and LAPACK implementation in Debian[1] and Gentoo[2]. The goal is to have one way to depend on the BLAS/LAPACK libraries that all packages must use. The attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK provider. Derivations that don’t care how BLAS and LAPACK are implemented can just use blas and lapack directly. If you do care what you get (perhaps for some CPP), you should verify that blas and lapack match what you expect with an assertion. The “blas” package collides with the old “blas” reference implementation. This has been renamed to “blas-reference”. In addition, “lapack-reference” is also included, corresponding to “liblapack” from Netlib.org. Currently, there are 3 providers of the BLAS and LAPACK interfaces: - lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org - OpenBLAS: an optimized version of BLAS and LAPACK - MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation By default, the above implementations all use the “LP64” BLAS and LAPACK ABI. This corresponds to “openblasCompat” and is the safest way to use BLAS/LAPACK. You may received some benefits from “ILP64” or 8-byte integer BLAS at the expense of breaking compatibility with some packages. This can be switched at build time with an override like: import <nixpkgs> { config.allowUnfree = true; overlays = [(self: super: { lapack = super.lapack.override { lapackProvider = super.lapack-reference; }; blas = super.blas.override { blasProvider = super.lapack-reference; }; })]; } or, switched at runtime via LD_LIBRARY_PATH like: $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary By default, we use OpenBLAS LP64 also known in Nixpkgs as openblasCompat. [1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries [2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
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, lapack
linbox: init at 1.5.2
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, fflas-ffpack
, gmpxx
, withSage ? false # sage support
}:
blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider This is based on previous work for switching between BLAS and LAPACK implementation in Debian[1] and Gentoo[2]. The goal is to have one way to depend on the BLAS/LAPACK libraries that all packages must use. The attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK provider. Derivations that don’t care how BLAS and LAPACK are implemented can just use blas and lapack directly. If you do care what you get (perhaps for some CPP), you should verify that blas and lapack match what you expect with an assertion. The “blas” package collides with the old “blas” reference implementation. This has been renamed to “blas-reference”. In addition, “lapack-reference” is also included, corresponding to “liblapack” from Netlib.org. Currently, there are 3 providers of the BLAS and LAPACK interfaces: - lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org - OpenBLAS: an optimized version of BLAS and LAPACK - MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation By default, the above implementations all use the “LP64” BLAS and LAPACK ABI. This corresponds to “openblasCompat” and is the safest way to use BLAS/LAPACK. You may received some benefits from “ILP64” or 8-byte integer BLAS at the expense of breaking compatibility with some packages. This can be switched at build time with an override like: import <nixpkgs> { config.allowUnfree = true; overlays = [(self: super: { lapack = super.lapack.override { lapackProvider = super.lapack-reference; }; blas = super.blas.override { blasProvider = super.lapack-reference; }; })]; } or, switched at runtime via LD_LIBRARY_PATH like: $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary By default, we use OpenBLAS LP64 also known in Nixpkgs as openblasCompat. [1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries [2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
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blas,lapack: use isILP64 instead of is64bit This is a better name since we have multiple 64-bit things that could be referred to. LP64 : integer=32, long=64, pointer=64 ILP64 : integer=64, long=64, pointer=64
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assert (!blas.isILP64) && (!lapack.isILP64);
blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider This is based on previous work for switching between BLAS and LAPACK implementation in Debian[1] and Gentoo[2]. The goal is to have one way to depend on the BLAS/LAPACK libraries that all packages must use. The attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK provider. Derivations that don’t care how BLAS and LAPACK are implemented can just use blas and lapack directly. If you do care what you get (perhaps for some CPP), you should verify that blas and lapack match what you expect with an assertion. The “blas” package collides with the old “blas” reference implementation. This has been renamed to “blas-reference”. In addition, “lapack-reference” is also included, corresponding to “liblapack” from Netlib.org. Currently, there are 3 providers of the BLAS and LAPACK interfaces: - lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org - OpenBLAS: an optimized version of BLAS and LAPACK - MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation By default, the above implementations all use the “LP64” BLAS and LAPACK ABI. This corresponds to “openblasCompat” and is the safest way to use BLAS/LAPACK. You may received some benefits from “ILP64” or 8-byte integer BLAS at the expense of breaking compatibility with some packages. This can be switched at build time with an override like: import <nixpkgs> { config.allowUnfree = true; overlays = [(self: super: { lapack = super.lapack.override { lapackProvider = super.lapack-reference; }; blas = super.blas.override { blasProvider = super.lapack-reference; }; })]; } or, switched at runtime via LD_LIBRARY_PATH like: $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary By default, we use OpenBLAS LP64 also known in Nixpkgs as openblasCompat. [1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries [2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
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linbox: init at 1.5.2
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stdenv.mkDerivation rec {
pname = "linbox";
linbox: backport upstream fixes References: https://github.com/linbox-team/linbox/commit/f78117d9c365efd46f5ea2903b553a08c4029aeb https://github.com/linbox-team/linbox/commit/4ff828e20053ab2ef9adc4ce6931d159fd513cef Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
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version = "1.6.3"; # TODO: Check postPatch script on update
linbox: init at 1.5.2
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src = fetchFromGitHub {
owner = "linbox-team";
treewide: remove redundant quotes
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repo = pname;
linbox: init at 1.5.2
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rev = "v${version}";
linbox: 1.6.2 -> 1.6.3 (#63288) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/linbox/versions
2019-06-17 22:08:03 +02:00
sha256 = "10j6dspbsq7d2l4q3y0c1l1xwmaqqba2fxg59q5bhgk9h5d7q571";
linbox: init at 1.5.2
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};
nativeBuildInputs = [
autoreconfHook
treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix continuation of #109595 pkgconfig was aliased in 2018, however, it remained in all-packages.nix due to its wide usage. This cleans up the remaining references to pkgs.pkgsconfig and moves the entry to aliases.nix. python3Packages.pkgconfig remained unchanged because it's the canonical name of the upstream package on pypi.
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pkg-config
linbox: init at 1.5.2
2018-03-08 00:14:05 +01:00
];
buildInputs = [
givaro
linbox: Add darwin support
2018-08-18 22:54:22 +02:00
blas
linbox: init at 1.5.2
2018-03-08 00:14:05 +01:00
gmpxx
fflas-ffpack
];
linbox: backport upstream fixes References: https://github.com/linbox-team/linbox/commit/f78117d9c365efd46f5ea2903b553a08c4029aeb https://github.com/linbox-team/linbox/commit/4ff828e20053ab2ef9adc4ce6931d159fd513cef Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
2020-10-22 15:47:50 +02:00
patches = [
# Remove inappropriate `const &` qualifiers on data members that can be
# modified via member functions.
# See also: https://github.com/linbox-team/linbox/pull/256
./patches/linbox-pr256-part2.patch # TODO: Remove on 1.7.0 update
];
postPatch = ''
# Remove @LINBOXSAGE_LIBS@ that is actually undefined.
# See also: https://github.com/linbox-team/linbox/pull/249
# TODO: Remove on 1.7.0 update
find . -type f -exec sed -e 's/@LINBOXSAGE_LIBS@//' -i {} \;
'';
linbox: init at 1.5.2
2018-03-08 00:14:05 +01:00
configureFlags = [
blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider This is based on previous work for switching between BLAS and LAPACK implementation in Debian[1] and Gentoo[2]. The goal is to have one way to depend on the BLAS/LAPACK libraries that all packages must use. The attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK provider. Derivations that don’t care how BLAS and LAPACK are implemented can just use blas and lapack directly. If you do care what you get (perhaps for some CPP), you should verify that blas and lapack match what you expect with an assertion. The “blas” package collides with the old “blas” reference implementation. This has been renamed to “blas-reference”. In addition, “lapack-reference” is also included, corresponding to “liblapack” from Netlib.org. Currently, there are 3 providers of the BLAS and LAPACK interfaces: - lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org - OpenBLAS: an optimized version of BLAS and LAPACK - MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation By default, the above implementations all use the “LP64” BLAS and LAPACK ABI. This corresponds to “openblasCompat” and is the safest way to use BLAS/LAPACK. You may received some benefits from “ILP64” or 8-byte integer BLAS at the expense of breaking compatibility with some packages. This can be switched at build time with an override like: import <nixpkgs> { config.allowUnfree = true; overlays = [(self: super: { lapack = super.lapack.override { lapackProvider = super.lapack-reference; }; blas = super.blas.override { blasProvider = super.lapack-reference; }; })]; } or, switched at runtime via LD_LIBRARY_PATH like: $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary By default, we use OpenBLAS LP64 also known in Nixpkgs as openblasCompat. [1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries [2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
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"--with-blas-libs=-lblas"
linbox: init at 1.5.2
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"--disable-optimization"
pkgs/development/libraries: stdenv.lib -> lib
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] ++ lib.optionals stdenv.isx86_64 [
linbox: init at 1.5.2
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# disable SIMD instructions (which are enabled *when available* by default)
gcc.arch: refactor, move tables under lib/
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"--${if stdenv.hostPlatform.sse3Support then "enable" else "disable"}-sse3"
"--${if stdenv.hostPlatform.ssse3Support then "enable" else "disable"}-ssse3"
"--${if stdenv.hostPlatform.sse4_1Support then "enable" else "disable"}-sse41"
"--${if stdenv.hostPlatform.sse4_2Support then "enable" else "disable"}-sse42"
"--${if stdenv.hostPlatform.avxSupport then "enable" else "disable"}-avx"
"--${if stdenv.hostPlatform.avx2Support then "enable" else "disable"}-avx2"
"--${if stdenv.hostPlatform.fmaSupport then "enable" else "disable"}-fma"
"--${if stdenv.hostPlatform.fma4Support then "enable" else "disable"}-fma4"
pkgs/development/libraries: stdenv.lib -> lib
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] ++ lib.optionals withSage [
linbox: init at 1.5.2
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"--enable-sage"
];
doCheck = true;
linbox: Add darwin support
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enableParallelBuilding = true;
pkgs/development/libraries: stdenv.lib -> lib
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meta = with lib; {
linbox: init at 1.5.2
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description = "C++ library for exact, high-performance linear algebra";
maintainers: create sage team Maintaining all the packages whose updates might break some aspect of sage. For reference: https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
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license = licenses.lgpl21Plus;
maintainers = teams.sage.members;
platforms = platforms.unix;
treewide: Per RFC45, remove all unquoted URLs
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homepage = "https://linalg.org/";
linbox: init at 1.5.2
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};
}
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