2021-01-11 08:54:33 +01:00
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{ lib, stdenv, fetchurl, zlib }:
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2018-02-02 02:51:34 +01:00
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stdenv.mkDerivation rec {
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pname = "samtools";
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version = "0.1.19";
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src = fetchurl {
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2019-08-15 14:41:18 +02:00
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url = "mirror://sourceforge/samtools/${pname}-${version}.tar.bz2";
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2018-02-02 02:51:34 +01:00
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sha256 = "d080c9d356e5f0ad334007e4461cbcee3c4ca97b8a7a5a48c44883cf9dee63d4";
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};
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patches = [
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./samtools-0.1.19-no-curses.patch
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];
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buildInputs = [ zlib ];
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installPhase = ''
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mkdir -p $out/bin
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mkdir -p $out/share/man
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cp samtools $out/bin
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cp samtools.1 $out/share/man
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'';
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2021-01-11 08:54:33 +01:00
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meta = with lib; {
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2018-02-02 02:51:34 +01:00
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description = "Tools for manipulating SAM/BAM/CRAM format";
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license = licenses.mit;
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2020-04-01 03:11:51 +02:00
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homepage = "http://samtools.sourceforge.net/";
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2018-02-02 02:51:34 +01:00
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platforms = platforms.unix;
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maintainers = [ maintainers.unode ];
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};
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}
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