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Replacing MRAN mirror with posit

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This commit is contained in:
Nathan Viets 2023-03-02 19:37:27 -05:00
parent 022f809332
commit 2f430da1c6
3 changed files with 7 additions and 4 deletions
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4
pkgs/development/r-modules/default.nix
View file

@ -68,9 +68,9 @@ let
hydraPlatforms = [];
};
deriveCran = mkDerive {
mkHomepage = {name, snapshot, ...}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/";
mkHomepage = {name, snapshot, ...}: "https://cran.r-project.org/${snapshot}/web/packages/${name}/";
mkUrls = {name, version, snapshot}: [
"http://mran.revolutionanalytics.com/snapshot/${snapshot}/src/contrib/${name}_${version}.tar.gz"
"https://packagemanager.rstudio.com/cran/${snapshot}/src/contrib/${name}_${version}.tar.gz"
];
};

6
pkgs/development/r-modules/generate-r-packages.R
View file

@ -1,5 +1,6 @@
#!/usr/bin/env Rscript
library(data.table)
library(jsonlite)
library(parallel)
library(BiocManager)
cl <- makeCluster(10)
@ -11,12 +12,13 @@ if ("release" %in% biocVersion$BiocStatus) {
} else {
biocVersion <- max(as.numeric(as.character(biocVersion$Bioc)))
}
snapshotDate <- Sys.Date()-1
dates <- stream_in(url("https://packagemanager.rstudio.com/__api__/repos/2/transaction-dates"), verbose = FALSE)
snapshotDate <- as.Date(dates[nrow(dates), "alias"])
mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/")
, "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/")
, "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/")
, cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/")
, cran=paste0("https://packagemanager.rstudio.com/cran/", snapshotDate, "/src/contrib/")
)
mirrorType <- commandArgs(trailingOnly=TRUE)[1]

1
pkgs/development/r-modules/generate-shell.nix
View file

@ -15,6 +15,7 @@ stdenv.mkDerivation {
(rWrapper.override {
packages = with rPackages; [
data_table
jsonlite
parallel
BiocManager
];