From 788a8760766aebbe1b87f4a3e20e967e928e1879 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?L=C3=A1szl=C3=B3=20Kupcsik?= Date: Thu, 18 Apr 2024 00:52:05 +0200 Subject: [PATCH] rPackages.multicrispr: fix build Pulled upstream fix from latest Bioconductor --- pkgs/development/r-modules/bioc-packages.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 36fb5e2a30c4..f210ccbdbc44 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -1730,7 +1730,7 @@ in with self; { multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.20.0"; sha256="152h62f41r2lay2zpnllsfamy0m63w5bi5gnyy7q32rhmq9z2k3b"; depends=[aggregation BiocParallel data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare pbapply pheatmap qqman]; }; multiMiR = derive2 { name="multiMiR"; version="1.24.0"; sha256="0mxih9nfjmgq3zd2c08ahwhnx3ahynj9phyrii6chllm3jcsfx15"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; multiWGCNA = derive2 { name="multiWGCNA"; version="1.0.0"; sha256="1jp8amw31l45b2h9b138rmbzc43xx2swfs5pnlqladnnzwsbxvn3"; depends=[cowplot data_table dcanr dplyr flashClust ggalluvial ggplot2 ggrepel igraph patchwork readr reshape2 scales stringr SummarizedExperiment WGCNA]; }; - multicrispr = derive2 { name="multicrispr"; version="1.12.3"; sha256="13ahvfxp5jkjrhdp3bz480h2k3m055brni22dbl3144f9lnyrw5b"; depends=[assertive_base assertive_files assertive_numbers assertive_sets BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; }; + multicrispr = derive2 { name="multicrispr"; version="1.12.9"; sha256="1rqd4l7gh48kviy9r5g5v6iq36p1h3gid9f250ps3zygc809garm"; depends=[BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; }; multiscan = derive2 { name="multiscan"; version="1.62.0"; sha256="09shs3hpa285v3hsbrncljxs02dm10qcbnnx9ss6b16gbs6d34wi"; depends=[Biobase]; }; multtest = derive2 { name="multtest"; version="2.58.0"; sha256="0s8x2rg2xp6awg2cikybgxrxpi9f91jah7dskk5dnfkazd20di4j"; depends=[Biobase BiocGenerics MASS survival]; }; mumosa = derive2 { name="mumosa"; version="1.10.0"; sha256="1mmhfy8lh1yd02vgw9bg32850sb5l875as8bv3xgq55c78ishlgv"; depends=[batchelor beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph IRanges Matrix metapod S4Vectors ScaledMatrix scran scuttle SingleCellExperiment SummarizedExperiment uwot]; };