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Merge pull request #260359 from bcdarwin/update-jaxopt

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python310Packages.jaxopt: 0.5.5 -> 0.8.1
This commit is contained in:
Mario Rodas 2023-10-11 18:44:06 -05:00 committed by GitHub
commit b11ced7a9c
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GPG key ID: 4AEE18F83AFDEB23
4 changed files with 28 additions and 25 deletions
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19
pkgs/development/python-modules/bambi/default.nix
View file

@ -17,16 +17,16 @@
buildPythonPackage rec {
pname = "bambi";
version = "0.10.0";
format = "pyproject";
version = "0.12.0";
pyproject = true;
disabled = pythonOlder "3.8";
disabled = pythonOlder "3.9";
src = fetchFromGitHub {
owner = "bambinos";
repo = pname;
repo = "bambi";
rev = "refs/tags/${version}";
hash = "sha256-D04eTAlckEqgKA+59BRljlyneHYoqqZvLYmt/gBLHcU=";
hash = "sha256-36D8u813v2vWQdNqBWfM8YVnAJuLGvn5vqdHs94odmU=";
};
nativeBuildInputs = [
@ -55,16 +55,18 @@ buildPythonPackage rec {
disabledTests = [
# Tests require network access
"test_alias_equal_to_name"
"test_custom_prior"
"test_data_is_copied"
"test_distributional_model"
"test_extra_namespace"
"test_gamma_with_splines"
"test_non_distributional_model_with_categories"
"test_non_distributional_model"
"test_normal_with_splines"
"test_predict_offset"
# Assertion issue
"test_custom_likelihood_function"
"test_predict_new_groups"
"test_predict_new_groups_fail"
"test_set_alias_warnings"
];
pythonImportsCheck = [
@ -74,6 +76,7 @@ buildPythonPackage rec {
meta = with lib; {
homepage = "https://bambinos.github.io/bambi";
description = "High-level Bayesian model-building interface";
changelog = "https://github.com/bambinos/bambi/releases/tag/${version}";
license = licenses.mit;
maintainers = with maintainers; [ bcdarwin ];
};

22
pkgs/development/python-modules/blackjax/default.nix
View file

@ -2,8 +2,8 @@
, buildPythonPackage
, pythonOlder
, fetchFromGitHub
, fetchpatch
, pytestCheckHook
, setuptools-scm
, fastprogress
, jax
, jaxlib
@ -14,24 +14,21 @@
buildPythonPackage rec {
pname = "blackjax";
version = "0.9.6";
disabled = pythonOlder "3.7";
version = "1.0.0";
pyproject = true;
disabled = pythonOlder "3.8";
src = fetchFromGitHub {
owner = "blackjax-devs";
repo = pname;
rev = "refs/tags/${version}";
hash = "sha256-EieDu9SJxi2cp1bHlxX4vvFZeDGMGIm24GoR8nSyjvE=";
hash = "sha256-hqOKSHyZ/BmOu6MJLeecD3H1BbLbZqywmlBzn3xjQRk=";
};
patches = [
# remove in next release
(fetchpatch {
name = "fix-lbfgs-args";
url = "https://github.com/blackjax-devs/blackjax/commit/1aaa6f64bbcb0557b658604b2daba826e260cbc6.patch";
hash = "sha256-XyjorXPH5Ap35Tv1/lTeTWamjplJF29SsvOq59ypftE=";
})
];
nativeBuildInputs = [ setuptools-scm ];
env.SETUPTOOLS_SCM_PRETEND_VERSION = version;
propagatedBuildInputs = [
fastprogress
@ -56,6 +53,7 @@ buildPythonPackage rec {
meta = with lib; {
homepage = "https://blackjax-devs.github.io/blackjax";
description = "Sampling library designed for ease of use, speed and modularity";
changelog = "https://github.com/blackjax-devs/blackjax/releases/tag/${version}";
license = licenses.asl20;
maintainers = with maintainers; [ bcdarwin ];
};

5
pkgs/development/python-modules/chex/default.nix
View file

@ -15,7 +15,7 @@
buildPythonPackage rec {
pname = "chex";
version = "0.1.82";
version = "0.1.83";
format = "setuptools";
disabled = pythonOlder "3.9";
@ -24,7 +24,7 @@ buildPythonPackage rec {
owner = "deepmind";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-xBq22AaR2Tp1NSPefEyvCDeUYqRZlAf5LVHWo0luiXk=";
hash = "sha256-iEachJf5NjOnkMWdP0aVQHWNPgUUBkMnzHKq3GP7t4w=";
};
propagatedBuildInputs = [
@ -49,6 +49,7 @@ buildPythonPackage rec {
meta = with lib; {
description = "Chex is a library of utilities for helping to write reliable JAX code.";
homepage = "https://github.com/deepmind/chex";
changelog = "https://github.com/google-deepmind/chex/releases/tag/v${version}";
license = licenses.asl20;
maintainers = with maintainers; [ ndl ];
};

7
pkgs/development/python-modules/jaxopt/default.nix
View file

@ -16,16 +16,16 @@
buildPythonPackage rec {
pname = "jaxopt";
version = "0.5.5";
version = "0.8.1";
format = "setuptools";
disabled = pythonOlder "3.7";
disabled = pythonOlder "3.8";
src = fetchFromGitHub {
owner = "google";
repo = pname;
rev = "refs/tags/${pname}-v${version}";
hash = "sha256-WOsr/Dvguu9/qX6+LMlAKM3EANtYPtDu8Uo2157+bs0=";
hash = "sha256-5+GfRFzXyc1Ukp86NeK0qstTq9fkx+eDb4iXvxzRoKs=";
};
propagatedBuildInputs = [
@ -60,6 +60,7 @@ buildPythonPackage rec {
meta = with lib; {
homepage = "https://jaxopt.github.io";
description = "Hardware accelerated, batchable and differentiable optimizers in JAX";
changelog = "https://github.com/google/jaxopt/releases/tag/jaxopt-v${version}";
license = licenses.asl20;
maintainers = with maintainers; [ bcdarwin ];
};