Merge pull request #260359 from bcdarwin/update-jaxopt
python310Packages.jaxopt: 0.5.5 -> 0.8.1
This commit is contained in:
commit
b11ced7a9c
4 changed files with 28 additions and 25 deletions
pkgs/development/python-modules
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@ -17,16 +17,16 @@
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "bambi";
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pname = "bambi";
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version = "0.10.0";
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version = "0.12.0";
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format = "pyproject";
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pyproject = true;
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disabled = pythonOlder "3.8";
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disabled = pythonOlder "3.9";
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src = fetchFromGitHub {
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src = fetchFromGitHub {
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owner = "bambinos";
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owner = "bambinos";
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repo = pname;
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repo = "bambi";
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rev = "refs/tags/${version}";
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rev = "refs/tags/${version}";
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hash = "sha256-D04eTAlckEqgKA+59BRljlyneHYoqqZvLYmt/gBLHcU=";
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hash = "sha256-36D8u813v2vWQdNqBWfM8YVnAJuLGvn5vqdHs94odmU=";
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};
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};
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nativeBuildInputs = [
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nativeBuildInputs = [
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@ -55,16 +55,18 @@ buildPythonPackage rec {
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disabledTests = [
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disabledTests = [
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# Tests require network access
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# Tests require network access
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"test_alias_equal_to_name"
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"test_custom_prior"
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"test_custom_prior"
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"test_data_is_copied"
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"test_data_is_copied"
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"test_distributional_model"
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"test_distributional_model"
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"test_extra_namespace"
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"test_gamma_with_splines"
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"test_gamma_with_splines"
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"test_non_distributional_model_with_categories"
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"test_non_distributional_model"
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"test_non_distributional_model"
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"test_normal_with_splines"
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"test_normal_with_splines"
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"test_predict_offset"
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"test_predict_offset"
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# Assertion issue
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"test_predict_new_groups"
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"test_custom_likelihood_function"
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"test_predict_new_groups_fail"
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"test_set_alias_warnings"
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];
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];
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pythonImportsCheck = [
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pythonImportsCheck = [
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@ -74,6 +76,7 @@ buildPythonPackage rec {
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meta = with lib; {
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meta = with lib; {
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homepage = "https://bambinos.github.io/bambi";
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homepage = "https://bambinos.github.io/bambi";
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description = "High-level Bayesian model-building interface";
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description = "High-level Bayesian model-building interface";
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changelog = "https://github.com/bambinos/bambi/releases/tag/${version}";
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license = licenses.mit;
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license = licenses.mit;
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maintainers = with maintainers; [ bcdarwin ];
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maintainers = with maintainers; [ bcdarwin ];
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};
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};
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@ -2,8 +2,8 @@
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, buildPythonPackage
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, buildPythonPackage
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, pythonOlder
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, pythonOlder
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, fetchFromGitHub
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, fetchFromGitHub
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, fetchpatch
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, pytestCheckHook
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, pytestCheckHook
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, setuptools-scm
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, fastprogress
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, fastprogress
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, jax
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, jax
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, jaxlib
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, jaxlib
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@ -14,24 +14,21 @@
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "blackjax";
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pname = "blackjax";
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version = "0.9.6";
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version = "1.0.0";
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disabled = pythonOlder "3.7";
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pyproject = true;
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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src = fetchFromGitHub {
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owner = "blackjax-devs";
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owner = "blackjax-devs";
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repo = pname;
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repo = pname;
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rev = "refs/tags/${version}";
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rev = "refs/tags/${version}";
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hash = "sha256-EieDu9SJxi2cp1bHlxX4vvFZeDGMGIm24GoR8nSyjvE=";
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hash = "sha256-hqOKSHyZ/BmOu6MJLeecD3H1BbLbZqywmlBzn3xjQRk=";
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};
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};
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patches = [
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nativeBuildInputs = [ setuptools-scm ];
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# remove in next release
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(fetchpatch {
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env.SETUPTOOLS_SCM_PRETEND_VERSION = version;
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name = "fix-lbfgs-args";
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url = "https://github.com/blackjax-devs/blackjax/commit/1aaa6f64bbcb0557b658604b2daba826e260cbc6.patch";
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hash = "sha256-XyjorXPH5Ap35Tv1/lTeTWamjplJF29SsvOq59ypftE=";
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})
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];
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propagatedBuildInputs = [
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propagatedBuildInputs = [
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fastprogress
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fastprogress
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@ -56,6 +53,7 @@ buildPythonPackage rec {
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meta = with lib; {
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meta = with lib; {
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homepage = "https://blackjax-devs.github.io/blackjax";
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homepage = "https://blackjax-devs.github.io/blackjax";
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description = "Sampling library designed for ease of use, speed and modularity";
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description = "Sampling library designed for ease of use, speed and modularity";
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changelog = "https://github.com/blackjax-devs/blackjax/releases/tag/${version}";
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license = licenses.asl20;
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license = licenses.asl20;
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maintainers = with maintainers; [ bcdarwin ];
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maintainers = with maintainers; [ bcdarwin ];
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};
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};
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@ -15,7 +15,7 @@
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "chex";
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pname = "chex";
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version = "0.1.82";
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version = "0.1.83";
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format = "setuptools";
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format = "setuptools";
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disabled = pythonOlder "3.9";
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disabled = pythonOlder "3.9";
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@ -24,7 +24,7 @@ buildPythonPackage rec {
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owner = "deepmind";
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owner = "deepmind";
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repo = pname;
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repo = pname;
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rev = "refs/tags/v${version}";
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rev = "refs/tags/v${version}";
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hash = "sha256-xBq22AaR2Tp1NSPefEyvCDeUYqRZlAf5LVHWo0luiXk=";
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hash = "sha256-iEachJf5NjOnkMWdP0aVQHWNPgUUBkMnzHKq3GP7t4w=";
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};
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};
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propagatedBuildInputs = [
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propagatedBuildInputs = [
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@ -49,6 +49,7 @@ buildPythonPackage rec {
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meta = with lib; {
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meta = with lib; {
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description = "Chex is a library of utilities for helping to write reliable JAX code.";
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description = "Chex is a library of utilities for helping to write reliable JAX code.";
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homepage = "https://github.com/deepmind/chex";
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homepage = "https://github.com/deepmind/chex";
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changelog = "https://github.com/google-deepmind/chex/releases/tag/v${version}";
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license = licenses.asl20;
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license = licenses.asl20;
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maintainers = with maintainers; [ ndl ];
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maintainers = with maintainers; [ ndl ];
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};
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};
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@ -16,16 +16,16 @@
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "jaxopt";
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pname = "jaxopt";
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version = "0.5.5";
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version = "0.8.1";
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format = "setuptools";
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format = "setuptools";
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disabled = pythonOlder "3.7";
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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src = fetchFromGitHub {
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owner = "google";
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owner = "google";
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repo = pname;
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repo = pname;
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rev = "refs/tags/${pname}-v${version}";
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rev = "refs/tags/${pname}-v${version}";
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hash = "sha256-WOsr/Dvguu9/qX6+LMlAKM3EANtYPtDu8Uo2157+bs0=";
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hash = "sha256-5+GfRFzXyc1Ukp86NeK0qstTq9fkx+eDb4iXvxzRoKs=";
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};
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};
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propagatedBuildInputs = [
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propagatedBuildInputs = [
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@ -60,6 +60,7 @@ buildPythonPackage rec {
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meta = with lib; {
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meta = with lib; {
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homepage = "https://jaxopt.github.io";
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homepage = "https://jaxopt.github.io";
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description = "Hardware accelerated, batchable and differentiable optimizers in JAX";
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description = "Hardware accelerated, batchable and differentiable optimizers in JAX";
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changelog = "https://github.com/google/jaxopt/releases/tag/jaxopt-v${version}";
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license = licenses.asl20;
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license = licenses.asl20;
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maintainers = with maintainers; [ bcdarwin ];
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maintainers = with maintainers; [ bcdarwin ];
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};
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};
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