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Merge pull request #298093 from r-ryantm/auto-update/python311Packages.snakemake-interface-executor-plugins

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python311Packages.snakemake-interface-executor-plugins: 8.2.0 -> 9.1.0
This commit is contained in:
Dmitry Kalinkin 2024-03-31 00:47:45 -04:00 committed by GitHub
commit c459054f7e
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GPG key ID: B5690EEEBB952194
5 changed files with 46 additions and 7 deletions
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5
pkgs/applications/science/misc/snakemake/default.nix
View file

@ -6,14 +6,14 @@
python3.pkgs.buildPythonApplication rec {
pname = "snakemake";
version = "8.4.12";
version = "8.10.4";
format = "setuptools";
src = fetchFromGitHub {
owner = "snakemake";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-ehQIrTw1+klFW+Hu4WsWaCJ0YoN2hIqryqqaoNQb1us=";
hash = "sha256-SZf//Z1rLHyvW/f0U6kEBzV1NjDEDG1OcFl9/JR+i/g=";
# https://github.com/python-versioneer/python-versioneer/issues/217
postFetch = ''
sed -i "$out"/snakemake/_version.py -e 's#git_refnames = ".*"#git_refnames = " (tag: v${version})"#'
@ -48,6 +48,7 @@ python3.pkgs.buildPythonApplication rec {
snakemake-interface-executor-plugins
snakemake-interface-common
snakemake-interface-storage-plugins
snakemake-interface-report-plugins
stopit
tabulate
throttler

6
pkgs/development/python-modules/snakemake-executor-plugin-cluster-generic/default.nix
View file

@ -8,14 +8,14 @@
buildPythonPackage rec {
pname = "snakemake-executor-plugin-cluster-generic";
version = "1.0.8";
version = "1.0.9";
format = "pyproject";
src = fetchFromGitHub {
owner = "snakemake";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-+aGd+E+VQb7MflsiUgFR98AyeetZxbc4gdvU1JWJNcM=";
hash = "sha256-RHMefoJOZb6TjRsFCORLFdHtI5ZpTsV6CHrjHKMat9o=";
};
nativeBuildInputs = [
@ -31,7 +31,7 @@ buildPythonPackage rec {
meta = with lib; {
description = "Generic cluster executor for Snakemake";
homepage = "https://github.com/snakemake/snakemake-executor-plugin-cluster-generic/tags";
homepage = "https://github.com/snakemake/snakemake-executor-plugin-cluster-generic";
license = licenses.mit;
maintainers = with maintainers; [ veprbl ];
};

4
pkgs/development/python-modules/snakemake-interface-executor-plugins/default.nix
View file

@ -9,14 +9,14 @@
buildPythonPackage rec {
pname = "snakemake-interface-executor-plugins";
version = "8.2.0";
version = "9.1.0";
format = "pyproject";
src = fetchFromGitHub {
owner = "snakemake";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-ZkhayXWy83/INRH7FYwFkhgHL+nSj7ReYC9I97SEeTM=";
hash = "sha256-DW8fxBBP6U7N0Hgk/enOzUz68L7pCjVl/8MFCy6PKxg=";
};
nativeBuildInputs = [

36
pkgs/development/python-modules/snakemake-interface-report-plugins/default.nix Normal file
View file

@ -0,0 +1,36 @@
{ lib
, buildPythonPackage
, fetchFromGitHub
, poetry-core
, snakemake-interface-common
}:
buildPythonPackage rec {
pname = "snakemake-interface-report-plugins";
version = "1.0.0";
format = "pyproject";
src = fetchFromGitHub {
owner = "snakemake";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-30x4avA3FrqZ4GoTl6Js5h3VG5LW7BNHOcNWxznXoT0=";
};
nativeBuildInputs = [
poetry-core
];
propagatedBuildInputs = [
snakemake-interface-common
];
pythonImportsCheck = [ "snakemake_interface_report_plugins" ];
meta = with lib; {
description = "The interface for Snakemake report plugins";
homepage = "https://github.com/snakemake/snakemake-interface-report-plugins";
license = licenses.mit;
maintainers = with maintainers; [ veprbl ];
};
}

2
pkgs/top-level/python-packages.nix
View file

@ -13846,6 +13846,8 @@ self: super: with self; {
snakemake-interface-executor-plugins = callPackage ../development/python-modules/snakemake-interface-executor-plugins { };
snakemake-interface-report-plugins = callPackage ../development/python-modules/snakemake-interface-report-plugins { };
snakemake-interface-storage-plugins = callPackage ../development/python-modules/snakemake-interface-storage-plugins { };
snakebite = callPackage ../development/python-modules/snakebite { };