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python311Packages.jaxopt: apply patch / disable failing tests after scipy 1.12 update

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add patch and disable failing aarch64 linux tests
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annalee 2024-02-04 13:26:59 +00:00
parent b4781965cd
commit edcd5ae003
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1 changed files with 19 additions and 0 deletions
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pkgs/development/python-modules/jaxopt/default.nix
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@ -1,7 +1,9 @@
{ lib { lib
, stdenv
, buildPythonPackage , buildPythonPackage
, pythonOlder , pythonOlder
, fetchFromGitHub , fetchFromGitHub
, fetchpatch
, pytest-xdist , pytest-xdist
, pytestCheckHook , pytestCheckHook
, absl-py , absl-py
@ -29,6 +31,16 @@ buildPythonPackage rec {
hash = "sha256-T/BHSnuk3IRuLkBj3Hvb/tFIb7Au25jjQtvwL28OU1U="; hash = "sha256-T/BHSnuk3IRuLkBj3Hvb/tFIb7Au25jjQtvwL28OU1U=";
}; };
patches = [
# fix failing tests from scipy 1.12 update
# https://github.com/google/jaxopt/pull/574
(fetchpatch {
name = "scipy-1.12-fix-tests.patch";
url = "https://github.com/google/jaxopt/commit/48b09dc4cc93b6bc7e6764ed5d333f9b57f3493b.patch";
hash = "sha256-v+617W7AhxA1Dzz+DBtljA4HHl89bRTuGi1QfatobNY=";
})
];
propagatedBuildInputs = [ propagatedBuildInputs = [
absl-py absl-py
jax jax
@ -54,6 +66,13 @@ buildPythonPackage rec {
"jaxopt.tree_util" "jaxopt.tree_util"
]; ];
disabledTests = lib.optionals (stdenv.isLinux && stdenv.isAarch64) [
# https://github.com/google/jaxopt/issues/577
"test_binary_logit_log_likelihood"
"test_solve_sparse"
"test_logreg_with_intercept_manual_loop3"
];
meta = with lib; { meta = with lib; {
homepage = "https://jaxopt.github.io"; homepage = "https://jaxopt.github.io";
description = "Hardware accelerated, batchable and differentiable optimizers in JAX"; description = "Hardware accelerated, batchable and differentiable optimizers in JAX";