This makes those files a bit easier to read. Also, for what it's worth,
it brings us one baby step closer to handling spaces in store paths.
Also, I optimized handling of many transitive deps with read. Probably,
not very beneficial, but nice to enforce the pkg-per-line structure.
Doing so let me find much dubious code and fix it.
Two misc notes:
- `propagated-user-env-packages` also needed to be adjusted as
sometimes it is copied to/from the propagated input files.
- `local fd` should ensure that file descriptors aren't clobbered
during recursion.
Upstream changes to the build system required adjusting many packages'
dependencies. On the Nixpkgs side, we no longer propagate the dependency
on cmake (to reduce closure size), so downstream dependencies had to be
adjusted for most packages that depend on kdelibs.
