Robert Scott
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ec24bab90e
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hmmer: restrict platforms to x86_64
technically big-endian powerpc with VMX is also supported, but
on x86, SSE is apparently *required* which means we can't build
a pure i686 version
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2021-11-20 19:17:57 +00:00 |
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Mario Rodas
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c8fb7191ad
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Merge pull request #143541 from r-ryantm/auto-update/bcftools
bcftools: 1.13 -> 1.14
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2021-11-14 21:14:30 -05:00 |
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Bruno Bzeznik
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4e5a245894
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obitools3: removed useless python restriction
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2021-11-08 07:51:48 +01:00 |
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Felix Buehler
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b52ab3b712
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pkgs/applications: rename name to pname&version part 2
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2021-11-07 14:53:06 +01:00 |
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Justin Bedő
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a5ac0a33a7
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Merge pull request #144529 from r-ryantm/auto-update/picard-tools
picard-tools: 2.26.3 -> 2.26.4
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2021-11-04 07:19:02 +11:00 |
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R. Ryantm
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509a8c298f
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picard-tools: 2.26.3 -> 2.26.4
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2021-11-03 19:57:00 +00:00 |
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Bruno Bzeznik
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0d9ec2d3f0
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obitools3: fix build on aarch64 + formatting
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2021-11-03 11:59:05 +02:00 |
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R. Ryantm
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6282512ef7
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dcm2niix: 1.0.20210317 -> 1.0.20211006
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2021-10-29 09:34:20 +00:00 |
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R. Ryantm
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5f6bd8187b
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bcftools: 1.13 -> 1.14
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2021-10-29 02:49:14 +00:00 |
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Artturi
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493094366b
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Merge pull request #142164 from jbedo/last
last: 1179 -> 1256
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2021-10-22 08:37:19 +03:00 |
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Justin Bedő
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4e83abb0cb
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Merge pull request #142199 from jbedo/picard
picard-tools: 2.26.2 -> 2.26.3
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2021-10-22 14:36:28 +11:00 |
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Justin Bedo
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f120d4daf4
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picard-tools: 2.26.2 -> 2.26.3
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2021-10-19 21:24:56 +11:00 |
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Justin Bedo
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08489c40ab
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fastp: 0.22.0 -> 0.23.1
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2021-10-19 21:09:05 +11:00 |
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Justin Bedo
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f7414542d0
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last: 1179 -> 1256
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2021-10-19 13:23:14 +11:00 |
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Justin Bedo
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02a1a2b3c8
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samtools: 1.11 -> 1.13
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2021-10-12 10:19:36 +11:00 |
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figsoda
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3109ff5765
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treewide: avoid use of lib.optional with list in inputs
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2021-10-04 13:02:42 -04:00 |
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R. RyanTM
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5becb56f71
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star: 2.7.8a -> 2.7.9a
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2021-09-24 10:37:28 +08:00 |
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Bobby Rong
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c25465873c
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Merge pull request #138022 from natsukium/blast/update
blast: 2.11.0 -> 2.12.0
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2021-09-23 14:48:35 +08:00 |
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Guillaume Girol
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4bc83aaffa
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Merge pull request #136489 from ehmry/nimPackages
nimpackages / buildNimPackage
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2021-09-22 18:35:38 +00:00 |
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figsoda
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0e575a459e
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Merge pull request #137974 from r-ryantm/auto-update/bowtie
bowtie: 1.3.0 -> 1.3.1
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2021-09-17 22:52:43 -04:00 |
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Bobby Rong
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12d38c57c3
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Merge pull request #134133 from Kranzes/auto-update/SPAdes
SPAdes: 3.15.2 -> 3.15.3
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2021-09-16 17:09:24 +08:00 |
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Tomoya Otabi
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1e9bd43214
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blast: 2.11.0 -> 2.12.0
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2021-09-15 15:33:44 +00:00 |
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R. RyanTM
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7bf7c9b92b
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bowtie: 1.3.0 -> 1.3.1
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2021-09-15 07:35:44 +00:00 |
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R. RyanTM
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e676fdcb90
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picard-tools: 2.26.0 -> 2.26.2
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2021-09-14 19:53:25 +00:00 |
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adisbladis
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fcf5397793
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Merge pull request #135905 from dukc/secondDmd2097
D compiler update
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2021-09-13 11:36:55 -05:00 |
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Sandro
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205c2ada66
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Merge pull request #136967 from bzizou/obitools
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2021-09-11 16:27:18 +02:00 |
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Bruno Bzeznik
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3bd1b0ed0d
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obitools3: 3.0.0-beta14 -> 3.0.1b11
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2021-09-07 09:38:41 +02:00 |
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Emery Hemingway
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323c503cba
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mosdepth: convert to buildNimPackage
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2021-09-05 11:20:02 +02:00 |
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Ate Eskola
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b2a39efa57
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sambamba 0.8.0 -> 0.8.1
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2021-08-31 12:37:49 +03:00 |
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davidak
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1b78608c69
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Merge pull request #135516 from bzizou/stacks
stacks: Changed license to gpl3Plus
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2021-08-26 03:50:48 +02:00 |
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Justin Bedo
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b1b57ec04e
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fastp: 0.20.1 -> 0.22.0
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2021-08-25 09:52:07 +10:00 |
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Ryan Mulligan
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8c2e2ffe95
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Merge pull request #135212 from r-ryantm/auto-update/stacks
stacks: 2.55 -> 2.59
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2021-08-24 09:03:17 -07:00 |
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Bruno Bzeznik
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a240cd9f4f
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stacks: Changed license to gpl3Plus
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2021-08-24 09:47:24 +02:00 |
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Ryan Mulligan
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997f4452a4
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Merge pull request #135255 from r-ryantm/auto-update/picard-tools
picard-tools: 2.25.7 -> 2.26.0
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2021-08-23 20:56:38 -07:00 |
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Jörg Thalheim
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11e5c3ac4b
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bowtie: fix homepage
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2021-08-22 16:08:28 +02:00 |
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R. RyanTM
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742cd80071
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picard-tools: 2.25.7 -> 2.26.0
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2021-08-22 10:47:38 +00:00 |
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R. RyanTM
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67c1256ddd
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stacks: 2.55 -> 2.59
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2021-08-22 07:08:39 +00:00 |
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Sebastián Mancilla
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8f94a33b38
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treewide: ensure pre/post phase hooks are strings
Some derivations use lib.optional or lib.optionals when setting pre/post
phase hooks. Ensure the proper lib.optionalString is used.
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2021-08-20 19:08:42 -04:00 |
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Ryan Mulligan
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ad59a67ec0
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Merge pull request #134444 from r-ryantm/auto-update/picard-tools
picard-tools: 2.25.1 -> 2.25.7
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2021-08-17 16:47:31 -07:00 |
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R. RyanTM
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1a23a8bb9e
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picard-tools: 2.25.1 -> 2.25.7
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2021-08-17 13:50:42 +00:00 |
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Ilan Joselevich
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9f5b3fafa0
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SPAdes: 3.15.2 -> 3.15.3
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2021-08-15 11:12:42 +03:00 |
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R. RyanTM
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5693a554e2
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minimap2: 2.17 -> 2.22
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2021-08-14 15:55:35 +00:00 |
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Artturi
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e69c8ea78e
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Merge pull request #111691 from jbedo/bowtie2
bowtie2: resolve missing runtime dependencies
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2021-08-07 04:03:47 +03:00 |
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Sandro
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04b5e62d8d
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Merge pull request #132468 from Stunkymonkey/applications-phases1
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2021-08-05 09:37:57 +02:00 |
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Felix Buehler
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be219752d2
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picard-tools: deprecate phases
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2021-08-03 00:04:29 +02:00 |
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Felix Buehler
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4b883542fe
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varscan: deprecate phases
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2021-08-03 00:04:16 +02:00 |
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Artturin
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f173c77476
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perlPackages.ImageMagick: rename from perlPackages.PerlMagick
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2021-08-02 20:05:00 +03:00 |
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Sandro
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1524f36b3e
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Merge pull request #131627 from jbedo/mosdepth
mosdepth: 0.3.1 -> 0.3.2
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2021-07-29 13:56:24 +00:00 |
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Sandro Jäckel
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cebfbdff37
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mrbayes: 3.2.7 -> 3.2.7a
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2021-07-27 14:30:23 +02:00 |
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Sandro Jäckel
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108ad942fb
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mrbayes: modernize
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2021-07-27 11:53:51 +02:00 |
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