{ stdenv, fetchurl, bzip2, gfortran, libX11, libXmu, libXt, libjpeg, libpng , libtiff, ncurses, pango, pcre, perl, readline, tcl, texLive, tk, xz, zlib , less, texinfo, graphviz, icu, pkgconfig, bison, imake, which, jdk, openblas , curl, Cocoa, Foundation, cf-private, libobjc, tzdata , withRecommendedPackages ? true , enableStrictBarrier ? false }: stdenv.mkDerivation rec { name = "R-3.2.3"; src = fetchurl { url = "http://cran.r-project.org/src/base/R-3/${name}.tar.gz"; sha256 = "b93b7d878138279234160f007cb9b7f81b8a72c012a15566e9ec5395cfd9b6c1"; }; buildInputs = [ bzip2 gfortran libX11 libXmu libXt libXt libjpeg libpng libtiff ncurses pango pcre perl readline texLive xz zlib less texinfo graphviz icu pkgconfig bison imake which jdk openblas curl ] ++ stdenv.lib.optionals (!stdenv.isDarwin) [ tcl tk ] ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa Foundation cf-private libobjc ]; patches = [ ./no-usr-local-search-paths.patch ]; preConfigure = '' configureFlagsArray=( --disable-lto --with${stdenv.lib.optionalString (!withRecommendedPackages) "out"}-recommended-packages --with-blas="-L${openblas}/lib -lopenblas" --with-lapack="-L${openblas}/lib -lopenblas" --with-readline --with-tcltk --with-tcl-config="${tcl}/lib/tclConfig.sh" --with-tk-config="${tk}/lib/tkConfig.sh" --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-system-zlib --with-system-bzlib --with-system-pcre --with-system-xz --with-ICU ${stdenv.lib.optionalString enableStrictBarrier "--enable-strict-barrier"} --enable-R-shlib AR=$(type -p ar) AWK=$(type -p gawk) CC=$(type -p gcc) CXX=$(type -p g++) FC="${gfortran}/bin/gfortran" F77="${gfortran}/bin/gfortran" JAVA_HOME="${jdk}" RANLIB=$(type -p ranlib) R_SHELL="${stdenv.shell}" '' + stdenv.lib.optionalString stdenv.isDarwin '' --without-tcltk --without-aqua --disable-R-framework CC="clang" CXX="clang++" OBJC="clang" '' + '' ) echo "TCLLIBPATH=${tk}/lib" >>etc/Renviron.in ''; postConfigure = stdenv.lib.optionalString stdenv.isDarwin '' sed -i 's|/usr/share/zoneinfo|${tzdata}/share/zoneinfo|g' src/library/base/R/datetime.R sed -i 's|getenv("R_SHARE_DIR")|"${tzdata}/share"|g' src/extra/tzone/localtime.c ''; installTargets = [ "install" "install-info" "install-pdf" ]; doCheck = true; enableParallelBuilding = true; setupHook = ./setup-hook.sh; meta = { homepage = "http://www.r-project.org/"; description = "Free software environment for statistical computing and graphics"; license = stdenv.lib.licenses.gpl2Plus; longDescription = '' GNU R is a language and environment for statistical computing and graphics that provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques, and is highly extensible. One of R's strengths is the ease with which well-designed publication-quality plots can be produced, including mathematical symbols and formulae where needed. R is an integrated suite of software facilities for data manipulation, calculation and graphical display. It includes an effective data handling and storage facility, a suite of operators for calculations on arrays, in particular matrices, a large, coherent, integrated collection of intermediate tools for data analysis, graphical facilities for data analysis and display either on-screen or on hardcopy, and a well-developed, simple and effective programming language which includes conditionals, loops, user-defined recursive functions and input and output facilities. ''; platforms = stdenv.lib.platforms.all; hydraPlatforms = stdenv.lib.platforms.linux; maintainers = [ stdenv.lib.maintainers.peti ]; }; }