33afbf39f6
checkInputs used to be added to nativeBuildInputs. Now we have nativeCheckInputs to do that instead. Doing this treewide change allows to keep hashes identical to before the introduction of nativeCheckInputs.
42 lines
1.2 KiB
Nix
42 lines
1.2 KiB
Nix
{ lib, python, fetchFromGitHub }:
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with python.pkgs;
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buildPythonApplication rec {
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pname = "deepTools";
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version = "3.5.1";
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src = fetchFromGitHub {
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owner = "deeptools";
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repo = "deepTools";
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rev = version;
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sha256 = "07v8vb2x4b0mgw0mvcj91vj1fqbcwizwsniysl2cvmv93gad8gbp";
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};
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propagatedBuildInputs = [
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numpy
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numpydoc
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scipy
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py2bit
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pybigwig
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pysam
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matplotlib
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plotly
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deeptoolsintervals
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];
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nativeCheckInputs = [ nose ];
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meta = with lib; {
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homepage = "https://deeptools.readthedocs.io/en/develop";
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description = "Tools for exploring deep DNA sequencing data";
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longDescription = ''
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deepTools contains useful modules to process the mapped reads data for multiple
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quality checks, creating normalized coverage files in standard bedGraph and bigWig
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file formats, that allow comparison between different files (for example, treatment and control).
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Finally, using such normalized and standardized files, deepTools can create many
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publication-ready visualizations to identify enrichments and for functional
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annotations of the genome.
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'';
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license = licenses.gpl3;
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maintainers = with maintainers; [ scalavision ];
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};
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}
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