33 lines
1 KiB
Nix
33 lines
1 KiB
Nix
{ lib
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, buildPythonPackage
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, fetchFromGitHub
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, pytest
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}:
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buildPythonPackage rec {
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pname = "PyVCF";
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version = "0.6.8";
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src = fetchFromGitHub {
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owner = "jamescasbon";
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repo = "PyVCF";
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rev = "476169cd457ba0caa6b998b301a4d91e975251d9";
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sha256 = "0qf9lwj7r2hjjp4bd4vc7nayrhblfm4qcqs4dbd43a6p4bj2jv5p";
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};
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checkInputs = [ pytest ];
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meta = with lib; {
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homepage = "https://pyvcf.readthedocs.io/en/latest/index.html";
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description = "A VCF (Variant Call Format) Parser for Python, supporting version 4.0 and 4.1";
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license = licenses.bsd3;
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maintainers = with maintainers; [ scalavision ];
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longDescription = ''
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The intent of this module is to mimic the csv module in the Python stdlib,
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as opposed to more flexible serialization formats like JSON or YAML.
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vcf will attempt to parse the content of each record based on the data
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types specified in the meta-information lines
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'';
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broken = true; # uses the 2to3 feature, that got removed in setuptools 0.58
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};
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}
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