R. Ryantm d4a5bdc264 seaview: 5.0.4 -> 5.0.5		2021-12-12 15:59:16 +00:00
..
ants	treewide: avoid use of lib.optional with list in inputs	2021-10-04 13:02:42 -04:00
aragorn
bayescan
bcftools	bcftools: 1.13 -> 1.14	2021-10-29 02:49:14 +00:00
bedops
bedtools
bftools
blast
bowtie
bowtie2
bppsuite
bwa
cd-hit
clustal-omega
cmtk	pkgs/applications: rename name to pname&version part 2	2021-11-07 14:53:06 +01:00
conglomerate
dcm2niix	dcm2niix: 1.0.20210317 -> 1.0.20211006	2021-10-29 09:34:20 +00:00
deeptools
delly	delly: 0.8.7 -> 0.9.1	2021-11-25 21:19:48 +11:00
diamond	pkgs/applications: rename name to pname&version part 2	2021-11-07 14:53:06 +01:00
ecopcr	pkgs/applications: rename name to pname&version part 2	2021-11-07 14:53:06 +01:00
eggnog-mapper
emboss	pkgs/applications: rename name to pname&version part 2	2021-11-07 14:53:06 +01:00
est-sfs
exonerate
EZminc
fastp	fastp: 0.23.1 -> 0.23.2	2021-12-02 08:03:17 +11:00
freebayes
genmap	genmap: init 1.3.0	2021-12-04 06:51:16 +11:00
hisat2
hmmer	hmmer: restrict platforms to x86_64	2021-11-20 19:17:57 +00:00
igv
inormalize
itsx
iv	pkgs/applications: rename name to pname&version part 2	2021-11-07 14:53:06 +01:00
kallisto
kent
kssd
last	last: 1179 -> 1256	2021-10-19 13:23:14 +11:00
lumpy
MACS2
macse
manta
megahit
meme-suite
messer-slim
migrate
minc-tools
minc-widgets
minia
minimap2
mni_autoreg
mosdepth
mrbayes
mrtrix	mrtrix: 3.0.2 -> unstable-2021-11-25	2021-11-30 21:03:53 -08:00
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg
obitools	obitools3: removed useless python restriction	2021-11-08 07:51:48 +01:00
octopus
paml
picard-tools	picard-tools: 2.26.4 -> 2.26.6	2021-12-04 07:51:31 +11:00
platypus
plink-ng
poretools
prodigal
quast
raxml
sambamba
samblaster
samtools	samtools: pull upstream fix for ncurses-6.3	2021-11-26 13:02:05 +00:00
seaview	seaview: 5.0.4 -> 5.0.5	2021-12-12 15:59:16 +00:00
snpeff
somatic-sniper
sortmerna
spades
stacks
star	star: 2.7.8a -> 2.7.9a	2021-09-24 10:37:28 +08:00
strelka
sumatools
svaba
tebreak
trimal
truvari
varscan
vcftools
whisper
xenomapper