nixpkgs/pkgs/development/python-modules/umap-learn/default.nix
2022-05-26 23:31:56 +02:00

69 lines
1.3 KiB
Nix

{ lib
, buildPythonPackage
, fetchFromGitHub
, keras
, numba
, numpy
, pynndescent
, pytestCheckHook
, pythonOlder
, scikit-learn
, scipy
, tensorflow
, tqdm
}:
buildPythonPackage rec {
pname = "umap-learn";
version = "0.5.3";
format = "setuptools";
disabled = pythonOlder "3.7";
src = fetchFromGitHub {
owner = "lmcinnes";
repo = "umap";
rev = version;
hash = "sha256-S2+k7Ec4AxsN6d0GUGnU81oLnBgmlZp8OmUFCNaUJYw=";
};
propagatedBuildInputs = [
numba
numpy
pynndescent
scikit-learn
scipy
tqdm
];
checkInputs = [
keras
pytestCheckHook
tensorflow
];
preCheck = ''
export HOME=$TMPDIR
'';
disabledTests = [
# Plot functionality requires additional packages.
# These test also fail with 'RuntimeError: cannot cache function' error.
"test_umap_plot_testability"
"test_plot_runs_at_all"
# Flaky test. Fails with AssertionError sometimes.
"test_sparse_hellinger"
"test_densmap_trustworthiness_on_iris_supervised"
# tensorflow maybe incompatible? https://github.com/lmcinnes/umap/issues/821
"test_save_load"
];
meta = with lib; {
description = "Uniform Manifold Approximation and Projection";
homepage = "https://github.com/lmcinnes/umap";
license = licenses.bsd3;
maintainers = with maintainers; [ costrouc ];
};
}