nixpkgs/pkgs/applications/science/biology/conglomerate/default.nix

34 lines
1.1 KiB
Nix

{ stdenv, fetchFromGitHub, cmake, coreutils, perlPackages, bicpl, libminc, zlib, minc_tools,
makeWrapper }:
stdenv.mkDerivation rec {
pname = "conglomerate";
name = "${pname}-2017-09-10";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "7343238bc6215942c7ecc885a224f24433a291b0";
sha256 = "1mlqgmy3jc13bv7d01rjwldxq0p4ayqic85xcl222hhifi3w2prr";
};
nativeBuildInputs = [ cmake makeWrapper ];
buildInputs = [ libminc zlib bicpl ];
propagatedBuildInputs = [ coreutils minc_tools ] ++ (with perlPackages; [ perl GetoptTabular MNI-Perllib ]);
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DBICPL_DIR=${bicpl}/lib/" ];
postFixup = ''
for p in $out/bin/*; do
wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${stdenv.lib.makeBinPath [ coreutils minc_tools ]}";
done
'';
meta = with stdenv.lib; {
homepage = https://github.com/BIC-MNI/conglomerate;
description = "More command-line utilities for working with MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
};
}