nixpkgs/pkgs/applications/science/biology
Ben Darwin 5cf446f41b ezminc: mark broken
Package refuses to build with current GCC (11), but building with older
GCC causes error linking libminc and I don't want to pin a bunch of
deps.

A newer version is available upstream but it only works with ITK 5.0
(see https://github.com/BIC-MNI/EZminc/issues/15),
but we have 4.x and 5.2.x in tree and I'm reluctant to add 5.0 just for
one package (even ITK 4.x is only used by ants and ezminc and should be
removed as soon as ants is upgraded).
2022-05-17 10:24:07 -07:00
..
angsd angsd: init at 0.937 2022-03-04 09:17:35 -06:00
ants
aragorn
bayescan bayescan: fix the build 2022-05-13 12:00:08 +02:00
bcftools bcftools: 1.14 -> 1.15 2022-02-25 11:12:05 -08:00
bedops
bedtools
bftools
blast blast: 2.12.0 -> 2.13.0 2022-04-29 09:39:10 -05:00
bowtie bowtie: fix build on case insensitive file systems 2022-05-11 03:20:03 -05:00
bowtie2
bppsuite
bwa bwa: pull upstream fix for -fno-common tollchains 2022-05-08 08:56:43 +01:00
cd-hit
clustal-omega treewide: add meta.mainProgram to many packages 2022-04-14 10:24:01 -07:00
cmtk cmtk: add -std=c++11 to fix build on gcc11 2022-04-15 11:15:30 -05:00
conglomerate
dcm2niix dcm2niix: support usage of suggested Cloudflare zlib 2022-04-18 15:00:45 -04:00
deeptools
delly
diamond
ecopcr
eggnog-mapper eggnog-mapper: 1.0.3 -> 2.1.7 2022-03-18 10:26:47 -05:00
emboss
est-sfs
exonerate
EZminc ezminc: mark broken 2022-05-17 10:24:07 -07:00
fastp
febio-studio
flywheel-cli flywheel-cli: init at 16.2.0 2022-03-28 15:54:39 -04:00
freebayes
genmap
hisat2
hmmer
igv
inormalize
itsx
iv
kallisto
kent
kssd treewide: move autoconf, automake to nativeBuildInputs 2022-03-30 20:17:24 -05:00
last last: 1260 -> 1268 2022-03-02 13:35:56 +11:00
MACS2
macse
manta
megahit Static build for megahit 2022-05-04 02:13:31 +02:00
meme-suite
messer-slim
migrate
minc-tools
minc-widgets
minia
minimap2 minimap2: enable aarch64 builds (#161169) 2022-03-04 12:27:29 +01:00
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
neuron neuron-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
niftyreg
niftyseg
obitools
octopus
paml
picard-tools treewide: add meta.mainProgram to many packages 2022-04-14 10:24:01 -07:00
platypus
plink-ng
poretools
prodigal
quast treewide: remove nativeBuildInputs that are in stdenv 2022-04-16 21:46:46 +03:00
raxml raxml-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
repseek
sambamba
samblaster
samtools Static build for samtools 2022-05-04 02:16:17 +02:00
seaview
snpeff
somatic-sniper
sortmerna
spades
stacks
star
strelka
subread
sumatools
svaba
tebreak treewide: remove nativeBuildInputs that are in stdenv 2022-04-16 21:46:46 +03:00
trimal
truvari
varscan
vcftools
whisper
xenomapper