33afbf39f6
checkInputs used to be added to nativeBuildInputs. Now we have nativeCheckInputs to do that instead. Doing this treewide change allows to keep hashes identical to before the introduction of nativeCheckInputs.
53 lines
1.3 KiB
Nix
53 lines
1.3 KiB
Nix
{ lib, stdenv
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, buildPythonPackage
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, fetchPypi
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, numpy
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, scipy
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, six
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, paramz
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, matplotlib
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, cython
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, nose
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}:
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buildPythonPackage rec {
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pname = "GPy";
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version = "1.10.0";
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src = fetchPypi {
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inherit pname version;
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sha256 = "a2b793ef8d0ac71739e7ba1c203bc8a5afa191058b42caa617e0e29aa52aa6fb";
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};
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buildInputs = [ cython ];
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propagatedBuildInputs = [ numpy scipy six paramz matplotlib ];
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nativeCheckInputs = [ nose ];
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# $ nosetests GPy/testing/*.py
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# => Ran 483 tests in 112.146s (on 8 cores)
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# So instead, run shorter set of tests
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checkPhase = ''
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nosetests GPy/testing/linalg_test.py
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'';
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# Rebuild cython-generated .c files since the included
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# ones were built with an older version of cython that is
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# incompatible with python3.9
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preBuild = ''
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for fn in $(find . -name '*.pyx'); do
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echo $fn | sed 's/\.\.pyx$/\.c/' | xargs ${cython}/bin/cython -3
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done
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'';
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pythonImportsCheck = [
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"GPy"
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];
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meta = with lib; {
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description = "Gaussian process framework in Python";
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homepage = "https://sheffieldml.github.io/GPy";
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license = licenses.bsd3;
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maintainers = with maintainers; [ bcdarwin ];
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broken = stdenv.isDarwin; # See inscrutable error message here: https://github.com/NixOS/nixpkgs/pull/107653#issuecomment-751527547
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};
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}
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