nixpkgs/pkgs/development/python-modules/gudhi/default.nix
Guillaume Girol 33afbf39f6 treewide: switch to nativeCheckInputs
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
2023-01-21 12:00:00 +00:00

64 lines
1.4 KiB
Nix

{ lib
, fetchFromGitHub
, buildPythonPackage
, cmake
, boost
, eigen
, gmp
, cgal_5 # see https://github.com/NixOS/nixpkgs/pull/94875 about cgal
, mpfr
, tbb
, numpy
, cython
, pybind11
, matplotlib
, scipy
, pytest
, enableTBB ? false
}:
buildPythonPackage rec {
pname = "gudhi";
version = "3.4.1";
src = fetchFromGitHub {
owner = "GUDHI";
repo = "gudhi-devel";
rev = "tags/gudhi-release-${version}";
fetchSubmodules = true;
sha256 = "1m03qazzfraxn62l1cb11icjz4x8q2sg9c2k3syw5v0yv9ndgx1v";
};
patches = [ ./remove_explicit_PYTHONPATH.patch ];
nativeBuildInputs = [ cmake numpy cython pybind11 matplotlib ];
buildInputs = [ boost eigen gmp cgal_5 mpfr ]
++ lib.optionals enableTBB [ tbb ];
propagatedBuildInputs = [ numpy scipy ];
nativeCheckInputs = [ pytest ];
cmakeFlags = [
"-DCMAKE_BUILD_TYPE=Release"
"-DWITH_GUDHI_PYTHON=ON"
"-DPython_ADDITIONAL_VERSIONS=3"
];
preBuild = ''
cd src/python
'';
checkPhase = ''
rm -r gudhi
${cmake}/bin/ctest --output-on-failure
'';
pythonImportsCheck = [ "gudhi" "gudhi.hera" "gudhi.point_cloud" "gudhi.clustering" ];
meta = {
description = "Library for Computational Topology and Topological Data Analysis (TDA)";
homepage = "https://gudhi.inria.fr/python/latest/";
downloadPage = "https://github.com/GUDHI/gudhi-devel";
license = with lib.licenses; [ mit gpl3 ];
maintainers = with lib.maintainers; [ yl3dy ];
};
}